Publications (last update: Oct 5, 2007)
Books and Edited Volumes:
- Dominique Groß, Natur in Silico--Agentbasierte Modelle komplexer natürlicher Systeme: eine Kritik, Mensch und Buch Verlag, Berlin, 2001
- Workshop Proceedings of the 8th. International Conference on the Simulation and Synthesis of Living Systems, E. Bilotta, D. Gross et al. (eds), University of New South Wales, Sydney, 2002.
- Artificial Life, Vol 11(4), special issue on dynamical hierarchies,
co-guest editor (together with T. Lenaerts and R. Watson), 2005.
Journal Articles:
- D. Gross and R. Strand, ``Can Agent-Based Models Assist Decisions
on Large-Scale Practical Problems? A Philosophical Analysis'', Complexity 5(6), 2000.
- D. Gross and D. Jefferies, ``Complexity Beyond Agent-Based Models'', Complexity International, Vol.8, 2001.
- D. Gross and B. McMullin, ``Is the Ansatz Right'', Artificial Life 7(4), 2001.
- D. Chu, R. Strand, and R. Fjelland, ``Theories of Complexity'', Complexity, 8(3), 2003.
- D. Chu, HC. Lee and T. Lenaerts, ``Emergence of Uptake Signals in Bacterial DNA'', Artificial Life, 11(3), 2005.
- D. Chu and W. Ho, ``A Category Theoretical Argument Against the
Possibility of Artificial Life--Robert Rosen's Central Proof
Revisited'', Artificial Life, 12(4),2006.
- D. Chui, J. Rowe, and HC. Lee, ``Various Models of the Emergence of
Uptake Signal Sequences on Bacterial DNA'', Journal of Theoretical
Biology,238, 2006.
- D. Chu and I. Blomfield, ``Orientational Control Is an Efficient Control Mechanism for Phase Switching in the E.coli fim system'', Journal of Theoretical Biology, 244(3), 2007.
- D. Chu and W. Ho, ``The Localization Hypothesis and Machines'', Artificial Life, 12(3), 2007.
- D. Chu and W. Ho, ``Computational Realisations of Living Systems'', Artificial Life, accepted, 2007.
- D. Chu, ``Criteria for conceptual and operational notions of complexity,'' Artificial Life, accepted, 2007.
- S. Haggett, D. Chu, and I. Marshall, ``Evolving a dynamic predictive coding mechanism for novelty detection'', Knowledge-Based Systems, accepted.
- D. Chu, J. Roobol and I. Blomfield, ``A theoretical interpretation of the transient sialic acid toxicity of a nanR mutant of Escherichia coli'', Journal of Molecular Biology, accepted.
Conference Articles:
- B. McMullin and D. Gross, ``Towards the Implementation of Autopoietic Artificial Agents'', in: Advances in Artifcial Life, Proceedings of the 6th European Conference, J. Kelemen, P. Sosik (Eds.), Springer-Verlag, 2001.
- D. Gross and B. McMullin, ``The Creation of Novelty in Artificial
Chemistries'', in: Artificial Life VIII: Proceedings of the Eighth
International Conference on the Simulation and Synthesis of Living
Systems, R. Standish, M. Bedau, and H. Abbass (eds), MIT Press,
Cambridge, 2002.
- D. Gross and T. Lenaerts, ``Towards a Definition of Dynamical
Hierarchies'', in: Workshop Proceedings of the 8th. International
Conference on the Simulation and Synthesis of Living Systems, E.
Bilotta et al. (eds), University of New South Wales, Sydney, 2002.
- D. Chu and R. Vaboe, ``Bonding as an Emergent Phenomenon in an
Abstract Artificial Chemistry'', Artificial Life IX : Proceedings of
the Ninth International Conference on the Simulation and Synthesis of
Living Systems, Jordan Pollack, M. Bedau, P. Husbands, T. Ikegami, R.
Watson, MIT Press, Cambridge, 2004.
- D. Chu and J. Rowe, ``Spread of Vector Borne Diseaseses in a
Population with Spatial Structure'', in: Parallel Problem Solving from
Nature - PPSN VIII: 8th International Conference, Birmingham, UK,
September 18-22, 2004, Proceedings Series: Lecture Notes in Computer
Science, Vol. 3242 X. Yao et al..
- D. Chu and J. Rowe, ``Approaching Perfect Mixing in a Simple Model
of the Spread of an Infectious Disease'', in the Proceedings of the
second Australian conference on Artificial Life Sydney Australia, Dec.
5-8, 2005: Recent Advances in Artificial Life, Advances in Natural
Computation: Vol. 3, H. Abbass et al. (Eds), World Scientific, 2005
- D. Chu and J. Rowe, ``A fitness-Landscape for the Evolution of Uptake Signal Sequences on Bacterial DNA'', in: Advances in Artifcial Life, Proceedings of the 8th European Conference, M. Capcarrere et al. (Eds.), Springer-Verlag, 2005.
- D. Chu, ``Evolving Genetic Regulatory Networks for Systems Biology'', in: Proceedings of the IEEE Congress of Evolutionary Computation, to be held in Singapore Sept 25-28, 2007 (forthcoming).
- S. Haggett, D. Chu and I. Marshall, ``Evolving a Dynamic Predictive
Coding Mechanism for Novelty Detection'', in: Proceedings of the
``AI-2007 Twenty-seventh SGAI International Conference on Artificial
Intelligence,'' to be held in Cambridge (UK), December 10-12, 2007
(forthcoming).
2007-08-31